STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ulaFHypothetical protein; Catalyzes the isomerization of L-ribulose 5-phosphate to D- xylulose 5-phosphate. Is involved in the anaerobic L-ascorbate utilization. (228 aa)    
Predicted Functional Partners:
ABX23083.1
Hypothetical protein; KEGG: stm:STM4387 1.6e-147 sgaU; putative hexulose-6-phosphate isomerase K03079; COG: COG3623 Putative L-xylulose-5-phosphate 3-epimerase; Psort location: Cytoplasmic, score:8.96.
  
 0.998
araA
Hypothetical protein; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.982
araB
Hypothetical protein; KEGG: spt:SPA0105 2.8e-301 araB; L-ribulokinase K00853; COG: COG1069 Ribulose kinase.
 
 
 0.981
xylB
Hypothetical protein; KEGG: spt:SPA3511 6.6e-254 xylB; xylulose kinase K00854; COG: COG1070 Sugar (pentulose and hexulose) kinases.
  
 
 0.926
ABX23921.1
Hypothetical protein; KEGG: sec:SC3415 9.0e-115 rpe; D-ribulose-5-phosphate 3-epimerase K01783; COG: COG0036 Pentose-5-phosphate-3-epimerase; Psort location: Cytoplasmic, score:8.96; Belongs to the ribulose-phosphate 3-epimerase family.
     
 0.913
araD
Hypothetical protein; Involved in the degradation of L-arabinose. Catalyzes the interconversion of L-ribulose 5-phosphate (LRu5P) and D-xylulose 5- phosphate (D-Xu5P) via a retroaldol/aldol mechanism (carbon-carbon bond cleavage analogous to a class II aldolase reaction).
  
  
 
0.902
ABX23084.1
Hypothetical protein; KEGG: stm:STM4386 2.3e-109 sgaH; putative hexulose phosphate synthase (arabino hexulose phosphate formaldehyde lyase) K03078; COG: COG0269 3-hexulose-6-phosphate synthase and related proteins; Psort location: Cytoplasmic, score:8.96.
 
  
 0.861
ABX23085.1
Hypothetical protein; KEGG: stm:STM4385 1.7e-72 ptxA; putative PTS enzyme IIsga subunit K02821; COG: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); Psort location: CytoplasmicMembrane, score:9.82.
 
  
 0.841
uxaC
Hypothetical protein; KEGG: spt:SPA3005 3.2e-254 uxaC; uronate isomerase (glucuronate isomerase) K01812; COG: COG1904 Glucuronate isomerase; Psort location: Cytoplasmic, score:8.96.
     
 0.815
ABX21339.1
Hypothetical protein; KEGG: stm:STM1506 4.0e-176 rspB; putative dehydrogenase K08322; COG: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; Psort location: Cytoplasmic, score:9.26.
    
  0.801
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.