STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX23096.1COG: COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription; Psort location: Cytoplasmic, score:8.96. (89 aa)    
Predicted Functional Partners:
ABX23097.1
COG: COG3789 Uncharacterized protein conserved in bacteria.
  
  
 0.900
ABX21184.1
Hypothetical protein; COG: COG1983 Putative stress-responsive transcriptional regulator.
  
 
 0.848
ABX24079.1
Hypothetical protein; KEGG: sec:SC3266 0. arcB; aerobic respiration control sensor protein K07648; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:9.97.
    
 
 0.830
yceH
COG: COG3132 Uncharacterized protein conserved in bacteria; Belongs to the UPF0502 family.
      
 0.813
ABX23095.1
COG: COG3766 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.46.
       0.804
ABX19958.1
Hypothetical protein; KEGG: stm:STM2958 0. barA; sensory histidine kinase K07678; COG: COG4999 Uncharacterized domain of BarA-like signal transduction histidine kinases; Psort location: CytoplasmicMembrane, score:7.88.
    
 
 0.793
ABX23611.1
Hypothetical protein; KEGG: spt:SPA3676 0. torS; two-component sensor protein histidine protein kinase K07647; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:9.82.
    
 
 0.793
ABX23094.1
Hypothetical protein; KEGG: pen:PSEEN1824 2.9e-17 glutathionylspermidine synthase; COG: COG0754 Glutathionylspermidine synthase.
       0.784
ABX21183.1
Hypothetical protein; COG: NOG14122 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
 
 0.699
ABX23093.1
Hypothetical protein; KEGG: eci:UTI89_C4787 9.4e-255 aidB; putative acyl-CoA dehydrogenase; COG: COG1960 Acyl-CoA dehydrogenases.
  
    0.551
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.