STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX23134.1Hypothetical protein; COG: NOG09783 non supervised orthologous group. (121 aa)    
Predicted Functional Partners:
ABX21396.1
Hypothetical protein; COG: NOG06063 non supervised orthologous group.
  
     0.774
ABX20899.1
Hypothetical protein; COG: NOG13894 non supervised orthologous group.
  
     0.773
ABX21970.1
COG: COG3637 Opacity protein and related surface antigens; Psort location: OuterMembrane, score:10.00.
  
     0.767
ABX23143.1
Hypothetical protein; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96.
  
   
 0.763
ABX20978.1
Hypothetical protein; KEGG: spt:SPA0993 4.0e-34 holE; DNA polymerase III, theta subunit K02345; COG: NOG13893 non supervised orthologous group.
  
     0.761
ABX20590.1
Hypothetical protein; COG: NOG14216 non supervised orthologous group.
  
     0.754
ABX23390.1
Hypothetical protein; COG: NOG06218 non supervised orthologous group.
  
     0.754
ABX24175.1
COG: COG5393 Predicted membrane protein.
  
     0.754
tus
Hypothetical protein; Trans-acting protein required for termination of DNA replication. Binds to DNA replication terminator sequences (terA to terF) to prevent the passage of replication forks. The termination efficiency will be affected by the affinity of this protein for the terminator sequence; Belongs to the Tus family.
  
     0.748
yciC
Hypothetical protein; COG: NOG06197 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.747
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.