STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX23143.1Hypothetical protein; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96. (191 aa)    
Predicted Functional Partners:
ABX20255.1
Hypothetical protein; COG: COG3104 Dipeptide/tripeptide permease; Psort location: CytoplasmicMembrane, score:10.00.
      
 0.810
ABX23134.1
Hypothetical protein; COG: NOG09783 non supervised orthologous group.
  
   
 0.763
ABX21710.1
Hypothetical protein; COG: COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor).
  
     0.756
ABX22320.1
Hypothetical protein; COG: NOG09846 non supervised orthologous group.
  
     0.754
ABX20590.1
Hypothetical protein; COG: NOG14216 non supervised orthologous group.
  
     0.749
ABX21671.1
Hypothetical protein; COG: COG5633 Predicted periplasmic lipoprotein.
  
     0.723
ABX24053.1
Hypothetical protein; COG: COG2732 Barstar, RNAse (barnase) inhibitor; Psort location: Cytoplasmic, score:8.96.
  
     0.722
wzzE
Hypothetical protein; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.
  
     0.708
cutA
Hypothetical protein; Involved in resistance toward heavy metals. Belongs to the CutA family.
     
 0.705
uspB
Hypothetical protein; COG: NOG09779 non supervised orthologous group.
  
     0.692
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.