Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABX23158.1Hypothetical protein; COG: COG2963 Transposase and inactivated derivatives. (103 aa)    
Predicted Functional Partners:
ABX24170.1
Hypothetical protein; COG: COG2801 Transposase and inactivated derivatives.
 
     0.780
ABX22916.1
Hypothetical protein; COG: COG2801 Transposase and inactivated derivatives.
  
     0.770
ABX22915.1
Hypothetical protein; COG: COG2801 Transposase and inactivated derivatives.
 
     0.585
ABX24169.1
Hypothetical protein; KEGG: nwi:Nwi_0782 2.4e-11 integrase, catalytic region K00986; COG: COG2801 Transposase and inactivated derivatives.
 
     0.554
ABX21913.1
Hypothetical protein; COG: COG2801 Transposase and inactivated derivatives.
 
     0.479
ABX21137.1
Hypothetical protein; KEGG: nwi:Nwi_0782 0.0070 integrase, catalytic region K00986; COG: COG2801 Transposase and inactivated derivatives.
 
   
 0.406
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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