Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABX23167.1Hypothetical protein; KEGG: chu:CHU_2225 1.3e-31 CHU large protein; gliding motility-related protein; possible adhesin AidA-related K01238; COG: COG5295 Autotransporter adhesin. (3194 aa)    
Predicted Functional Partners:
ABX20184.1
Hypothetical protein; KEGG: chu:CHU_1906 3.9e-51 CHU large protein, possible SAP or adhesin AidA-related K01238; COG: COG5295 Autotransporter adhesin.
  
  
 
0.929
ABX20182.1
Hypothetical protein; KEGG: pen:PSEEN0144 1.1e-95 type I toxin efflux ATP-binding protein; COG: COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.740
ABX23161.1
Hypothetical protein; KEGG: ava:Ava_1188 8.3e-19 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters K06147; COG: COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 0.628
ABX23245.1
Hypothetical protein; KEGG: reh:H16_B0690 7.1e-51 rtxB2; ABC-type RTX toxin transporter, ATPase and permease components: Prot1E family; COG: COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.611
ABX21859.1
Hypothetical protein; COG: COG0658 Predicted membrane metal-binding protein; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 0.608
ABX23163.1
COG: COG0845 Membrane-fusion protein.
 
   
 0.574
ABX24218.1
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:10.00.
  
  
 0.558
ABX21215.1
KEGG: sha:SH0507 0.0094 hypothetical protein K00567; COG: NOG08628 non supervised orthologous group; Psort location: OuterMembrane, score:10.00.
 
 
 0.550
ABX20181.1
COG: COG0845 Membrane-fusion protein.
 
  
 0.544
ABX20183.1
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:9.93.
 
  
 0.540
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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