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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX23172.1Hypothetical protein. (70 aa)    
Predicted Functional Partners:
ABX23171.1
Hypothetical protein; KEGG: sec:SC4185 2.6e-124 dmsC; putative anaerobic dimethyl sulfoxide reductase, subunit C K00397; COG: COG3302 DMSO reductase anchor subunit; Psort location: CytoplasmicMembrane, score:10.00.
       0.572
ABX23173.1
Hypothetical protein; KEGG: spt:SPA4124 2.8e-65 dmsB; anaerobic dimethyl sulfoxide reductase subunit B K00397; COG: COG0437 Fe-S-cluster-containing hydrogenase components 1.
       0.572
ABX23170.1
Hypothetical protein; KEGG: vfi:VFA0083 1.4e-24 ynfI; anaerobic dimethyl sulfoxide reductase chain YnfI K00397; COG: COG3381 Uncharacterized component of anaerobic dehydrogenases.
       0.429
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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