STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX23177.1Hypothetical protein; COG: NOG31352 non supervised orthologous group. (88 aa)    
Predicted Functional Partners:
ABX23169.1
Hypothetical protein; COG: NOG24086 non supervised orthologous group.
      
 0.883
ABX23175.1
Hypothetical protein; KEGG: stm:STM4304 1.3e-264 dcuS; sensory histidine kinase in two-component retgulatory system with DcuR, senses fumarate/C4-dicarboxylate K07701; COG: COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; Psort location: CytoplasmicMembrane, score:10.00.
     
 0.771
ABX23159.1
Hypothetical protein; KEGG: bli:BL05281 4.7e-07 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.26.
      
 0.529
ABX23178.1
Hypothetical protein; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.
       0.478
ABX23176.1
Hypothetical protein; KEGG: btk:BT9727_0488 1.3e-42 response regulator K07703; COG: COG4565 Response regulator of citrate/malate metabolism; Psort location: Cytoplasmic, score:8.96.
       0.401
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.