STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX23189.1Hypothetical protein; Psort location: Cytoplasmic, score:8.96. (85 aa)    
Predicted Functional Partners:
ABX23188.1
Hypothetical protein.
       0.557
ABX23187.1
Hypothetical protein; KEGG: bpm:BURPS1710b_2148 4.9e-05 JmjC domain protein K00476; COG: KOG2130 Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain; Psort location: Cytoplasmic, score:8.96.
       0.431
ABX23181.1
Hypothetical protein; KEGG: bur:Bcep18194_C7259 2.4e-105 ABC transporter, duplicated ATPase domains; COG: COG0488 ATPase components of ABC transporters with duplicated ATPase domains; Psort location: CytoplasmicMembrane, score:9.82.
       0.410
ABX23182.1
Hypothetical protein; KEGG: bcz:BCZK2057 8.0e-20 macrolide efflux protein K00953; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
       0.410
ABX23183.1
Hypothetical protein; COG: KOG2130 Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain.
       0.410
ABX23184.1
Hypothetical protein.
       0.410
ABX23185.1
Hypothetical protein; KEGG: ech:ECH_1107 3.6e-14 thiF; adenylyltransferase ThiF; COG: COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
       0.410
ABX23186.1
Hypothetical protein; COG: COG4166 ABC-type oligopeptide transport system, periplasmic component.
       0.410
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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