Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABX23217.1Hypothetical protein; KEGG: mtu:Rv3762c 2.7e-147 possible hydrolase; COG: COG2015 Alkyl sulfatase and related hydrolases. (665 aa)    
Predicted Functional Partners:
ABX23220.1
COG: COG1289 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:10.00.
 
    0.521
ABX24283.1
Hypothetical protein; KEGG: stm:STM3122 0. putative arylsulfatase K01130; COG: COG3119 Arylsulfatase A and related enzymes.
 
   
 0.517
ABX23221.1
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:10.00.
 
     0.501
ABX20348.1
Hypothetical protein; KEGG: ecc:c4719 1.3e-264 aslA; arylsulfatase K01130; COG: COG3119 Arylsulfatase A and related enzymes.
  
   
 0.500
ABX23219.1
Hypothetical protein; KEGG: eci:UTI89_C0735 0.0047 tolA; membrane spanning protein TolA K03646; COG: COG1566 Multidrug resistance efflux pump; Psort location: CytoplasmicMembrane, score:8.02.
 
     0.493
ABX23157.1
Hypothetical protein.
  
     0.471
ABX23218.1
Hypothetical protein; COG: NOG29453 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
       0.458
ABX21071.1
Hypothetical protein; KEGG: ypn:YPN_3044 6.1e-251 sulfatase; COG: COG3119 Arylsulfatase A and related enzymes.
  
   
 0.427
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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