Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABX23219.1Hypothetical protein; KEGG: eci:UTI89_C0735 0.0047 tolA; membrane spanning protein TolA K03646; COG: COG1566 Multidrug resistance efflux pump; Psort location: CytoplasmicMembrane, score:8.02. (343 aa)    
Predicted Functional Partners:
ABX23221.1
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:10.00.
 
 
 0.979
ABX23220.1
COG: COG1289 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.966
ABX23218.1
Hypothetical protein; COG: NOG29453 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
       0.813
macB
Hypothetical protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
  
 0.681
ABX20105.1
Hypothetical protein; KEGG: sgl:SG1466 5.5e-07 dethiobiotin synthase K01935; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
  
 
 0.643
ABX20649.1
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:10.00.
 
 
 0.593
mdtA
COG: COG0845 Membrane-fusion protein; Psort location: CytoplasmicMembrane, score:8.02; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.576
ABX23217.1
Hypothetical protein; KEGG: mtu:Rv3762c 2.7e-147 possible hydrolase; COG: COG2015 Alkyl sulfatase and related hydrolases.
 
     0.493
ABX24218.1
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:10.00.
  
 
 0.469
ABX24022.1
COG: COG0845 Membrane-fusion protein; Psort location: CytoplasmicMembrane, score:8.60; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.447
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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