STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX23223.1Hypothetical protein; KEGG: eci:UTI89_C1133 6.1e-15 hypothetical protein; COG: COG0790 FOG: TPR repeat, SEL1 subfamily. (229 aa)    
Predicted Functional Partners:
ABX23720.1
Hypothetical protein; COG: NOG06879 non supervised orthologous group.
  
     0.738
ABX21587.1
Hypothetical protein; KEGG: eci:UTI89_C1612 2.6e-13 ydaM; hypothetical protein YdaM; COG: COG2199 FOG: GGDEF domain.
  
     0.718
ABX20201.1
Hypothetical protein; COG: NOG17158 non supervised orthologous group.
  
     0.699
glaH
Hypothetical protein; Acts as an alpha-ketoglutarate-dependent dioxygenase catalyzing hydroxylation of glutarate (GA) to L-2-hydroxyglutarate (L2HG). Functions in a L-lysine degradation pathway that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate.
  
     0.670
ABX22873.1
Hypothetical protein; COG: NOG09075 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.658
yfeO
Hypothetical protein; KEGG: cpr:CPR_1400 1.4e-09 chloride channel protein K01529; COG: COG0038 Chloride channel protein EriC; Psort location: CytoplasmicMembrane, score:10.00.
  
    0.621
ABX22899.1
Hypothetical protein; KEGG: eci:UTI89_C5041 9.3e-145 yjiJ; hypothetical protein YjiJ K00403; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.599
ABX21236.1
Hypothetical protein; KEGG: pmu:PM0180 0.0023 murZ; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790; COG: COG3187 Heat shock protein.
  
    0.588
ABX23228.1
Hypothetical protein; KEGG: pmu:PM0023 0.00015 nrfA; nitrite reductase periplasmic cytochrome c552 K03385; COG: NOG06794 non supervised orthologous group.
  
     0.588
ABX20628.1
Hypothetical protein; KEGG: eco:b2147 8.0e-19 yeiA, yeiA'; dihydropyrimidine dehydrogenase; COG: COG1146 Ferredoxin; Psort location: Cytoplasmic, score:8.96.
  
     0.574
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.