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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX23247.1Hypothetical protein; KEGG: fnu:FN0522 5.0e-07 exonuclease SBCC K03546; COG: COG0845 Membrane-fusion protein; Psort location: CytoplasmicMembrane, score:8.02. (425 aa)    
Predicted Functional Partners:
ABX23246.1
Hypothetical protein; KEGG: mmr:Mmar10_2493 2.1e-21 serralysin K01406; COG: NOG39362 non supervised orthologous group.
 
  
 0.999
ABX23248.1
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:10.00.
 
   0.999
ABX23245.1
Hypothetical protein; KEGG: reh:H16_B0690 7.1e-51 rtxB2; ABC-type RTX toxin transporter, ATPase and permease components: Prot1E family; COG: COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.994
ABX23249.1
Hypothetical protein; KEGG: pfa:PFL1155w 0.0032 GTP cyclohydrolase I K01495; COG: NOG07819 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
 
    0.962
ABX20034.1
Hypothetical protein; COG: NOG19627 non supervised orthologous group.
   
    0.885
ABX20182.1
Hypothetical protein; KEGG: pen:PSEEN0144 1.1e-95 type I toxin efflux ATP-binding protein; COG: COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.852
ABX23250.1
Hypothetical protein; COG: NOG26663 non supervised orthologous group.
  
    0.835
ABX20032.1
Hypothetical protein; KEGG: sec:SC2826 2.9e-221 invC; surface presentation of antigens; secretory proteins K03224; COG: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; Psort location: Cytoplasmic, score:8.96.
   
    0.808
ABX20183.1
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:9.93.
 
   0.796
ABX21215.1
KEGG: sha:SH0507 0.0094 hypothetical protein K00567; COG: NOG08628 non supervised orthologous group; Psort location: OuterMembrane, score:10.00.
  
  
 0.769
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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