Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABX23256.1COG: COG2315 Uncharacterized protein conserved in bacteria. (120 aa)    
Predicted Functional Partners:
ABX23257.1
Hypothetical protein; COG: COG0432 Uncharacterized conserved protein.
  
  
 0.961
ABX22859.1
Hypothetical protein; KEGG: vfi:VFA0008 4.3e-37 phospholipase; COG: COG4667 Predicted esterase of the alpha-beta hydrolase superfamily.
      
 0.704
ABX21053.1
Hypothetical protein; KEGG: ava:Ava_0187 0.0013 thioredoxin K03671; COG: NOG10255 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
      
 0.701
ABX23055.1
Hypothetical protein; COG: COG2105 Uncharacterized conserved protein.
     
 0.597
aphA
Hypothetical protein; Dephosphorylates several organic phosphate monoesters. Also has a phosphotransferase activity catalyzing the transfer of low-energy phosphate groups from organic phosphate monoesters to free hydroxyl groups of various organic compounds (By similarity).
       0.586
ynfB
Hypothetical protein; COG: NOG11441 non supervised orthologous group; Belongs to the UPF0482 family.
      
 0.425
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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