Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABX23268.1COG: COG3237 Uncharacterized protein conserved in bacteria; Belongs to the UPF0337 (CsbD) family. (69 aa)    
Predicted Functional Partners:
ABX22862.1
Hypothetical protein; KEGG: hit:NTHI0707 0.00029 fkbY; probable FKBP-type peptidyl-prolyl cis-trans isomerase K03772; COG: COG2823 Predicted periplasmic or secreted lipoprotein; Psort location: Periplasmic, score:10.00.
 
    0.955
ytjA
Hypothetical protein; COG: NOG16919 non supervised orthologous group.
 
    0.923
ABX24134.1
Hypothetical protein; COG: COG2823 Predicted periplasmic or secreted lipoprotein; Psort location: Periplasmic, score:9.76.
 
    0.678
ABX21304.1
Hypothetical protein; KEGG: pfl:PFL_0043 1.7e-42 osmC; hydroperoxide resistance protein OsmC K04063; COG: COG1764 Predicted redox protein, regulator of disulfide bond formation.
 
  
 0.667
ABX22766.1
Hypothetical protein; KEGG: efa:EF0685 0.0030 rotamase family protein K07533; COG: NOG17119 non supervised orthologous group.
   
    0.642
ABX24419.1
Hypothetical protein; COG: NOG13901 non supervised orthologous group.
   
    0.642
ABX20116.1
Hypothetical protein; COG: COG4575 Uncharacterized conserved protein.
  
  
 0.616
ABX21211.1
Hypothetical protein; COG: NOG31342 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
   
    0.562
ABX24443.1
Hypothetical protein; COG: NOG14132 non supervised orthologous group.
   
    0.562
ABX20125.1
COG: COG1652 Uncharacterized protein containing LysM domain.
  
    0.522
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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