Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABX23289.1Hypothetical protein; COG: NOG14141 non supervised orthologous group. (81 aa)    
Predicted Functional Partners:
ABX23288.1
Hypothetical protein; COG: NOG06220 non supervised orthologous group.
  
  
 0.919
ABX23286.1
Hypothetical protein; COG: NOG06257 non supervised orthologous group; Psort location: OuterMembrane, score:9.52.
  
  
 0.778
ABX23287.1
Hypothetical protein; COG: NOG06780 non supervised orthologous group.
  
  
 0.755
ABX20724.1
Hypothetical protein; KEGG: sec:SC2090 1.6e-195 udg; UDP-glucose/GDP-mannose dehydrogenase K00012; COG: COG1004 Predicted UDP-glucose 6-dehydrogenase; Psort location: Cytoplasmic, score:8.96.
   
    0.555
psiE
COG: COG3223 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.46.
       0.426
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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