STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX23298.1Hypothetical protein; COG: COG1414 Transcriptional regulator. (285 aa)    
Predicted Functional Partners:
ABX23297.1
Hypothetical protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
       0.635
ABX21344.1
Hypothetical protein; KEGG: msm:MSMEG_3400 3.2e-08 glutamyl-tRNA(Gln) amidotransferase subunit A K01957; COG: COG1802 Transcriptional regulators; Psort location: Cytoplasmic, score:8.96.
  
    0.597
ABX22096.1
Hypothetical protein; KEGG: eci:UTI89_C0709 6.0e-102 ybgJ; hypothetical protein YbgJ K01457; COG: COG2049 Allophanate hydrolase subunit 1.
  
    0.581
ABX22095.1
Hypothetical protein; KEGG: eci:UTI89_C0710 2.0e-142 ybgK; hypothetical protein K01941; COG: COG1984 Allophanate hydrolase subunit 2.
  
    0.537
ABX21288.1
Hypothetical protein; KEGG: msm:MSMEG_3400 8.3e-08 glutamyl-tRNA(Gln) amidotransferase subunit A K01957; COG: COG1802 Transcriptional regulators.
  
    0.449
ABX23743.1
Hypothetical protein; KEGG: bur:Bcep18194_B1740 8.0e-06 transcriptional regulator, GntR family with aminotransferase activity K00825; COG: COG2186 Transcriptional regulators; Psort location: Cytoplasmic, score:8.96.
  
  
 0.436
nanR
Hypothetical protein; Transcriptional repressor that controls expression of the genes required for the catabolism of sialic acids.
  
  
 0.422
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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