Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ABX23308.1Hypothetical protein; KEGG: rru:Rru_A1385 1.3e-97 two component, sigma54 specific, transcriptional regulator, fis family; COG: COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; Psort location: Cytoplasmic, score:9.97. (441 aa)    
Predicted Functional Partners:
ABX23309.1
Hypothetical protein; KEGG: sec:SC4054 1.4e-253 hydH, hydG; sensory kinase in two component regulatory system with HydG K07709; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.998
ABX23310.1
Hypothetical protein; Binds zinc. Could be an important component of the zinc- balancing mechanism; Belongs to the ZraP family.
 
   
 0.868
ABX19958.1
Hypothetical protein; KEGG: stm:STM2958 0. barA; sensory histidine kinase K07678; COG: COG4999 Uncharacterized domain of BarA-like signal transduction histidine kinases; Psort location: CytoplasmicMembrane, score:7.88.
  
 
 0.856
ABX24087.1
Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.819
ABX21234.1
Hypothetical protein; KEGG: spt:SPA1236 0. nifJ; probable pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
     
 0.772
ABX24079.1
Hypothetical protein; KEGG: sec:SC3266 0. arcB; aerobic respiration control sensor protein K07648; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:9.97.
  
 
 0.693
ABX23464.1
Hypothetical protein; KEGG: stm:STM4006 1.0e-177 glnL; sensory kinase (phosphatase) in two-component regulatory system with GlnG (nitrogen regulator II, NRII) K07708; COG: COG3852 Signal transduction histidine kinase, nitrogen specific; Psort location: CytoplasmicMembrane, score:9.82.
 
 0.677
ABX24077.1
Hypothetical protein; KEGG: stt:t3247 0. gltB; glutamate synthase [NADPH] large chain precursor K00265; COG: COG0069 Glutamate synthase domain 2; Psort location: Cytoplasmic, score:8.96.
      
 0.672
ABX20872.1
Hypothetical protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
  
 0.637
fliP
Hypothetical protein; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
  
 0.594
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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