STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argEHypothetical protein; KEGG: stt:t3504 4.4e-209 argE; acetylornithine deacetylase K01438; COG: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; Psort location: Cytoplasmic, score:8.96; Belongs to the peptidase M20A family. ArgE subfamily. (383 aa)    
Predicted Functional Partners:
argG
Hypothetical protein; KEGG: sty:STY3470 2.2e-230 argG; argininosuccinate synthetase K01940; COG: COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
  
 0.973
ABX23017.1
Hypothetical protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
 
 0.928
ABX23023.1
Hypothetical protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
 
 0.926
argD-2
Hypothetical protein; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
 
 0.926
arcA
Hypothetical protein; KEGG: sty:STY4805 1.6e-218 arginine deiminase K01478; COG: COG2235 Arginine deiminase; Psort location: Cytoplasmic, score:8.96.
  
 
 0.913
argB
Hypothetical protein; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate.
 
  
 0.896
argC
Hypothetical protein; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
 
 
 0.891
ABX20465.1
Hypothetical protein; KEGG: stt:t0504 7.3e-255 putative amino acid decarboxylase K01586; COG: COG0019 Diaminopimelate decarboxylase; Psort location: Cytoplasmic, score:8.96.
    
 0.827
ABX20467.1
Hypothetical protein; KEGG: bce:BC2063 4.0e-05 alanine racemase K01775; COG: COG3457 Predicted amino acid racemase; Psort location: Cytoplasmic, score:8.96.
    
  0.802
argH
Hypothetical protein; KEGG: sec:SC4013 1.6e-236 argH; argininosuccinate lyase K01755; COG: COG0165 Argininosuccinate lyase; Psort location: Cytoplasmic, score:8.96.
  
  
 0.761
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.