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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX23420.1Hypothetical protein; KEGG: ece:Z5443 1.7e-19 frvA; PTS system, fructose-specific IIA component K02768; COG: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type). (65 aa)    
Predicted Functional Partners:
ABX23421.1
Hypothetical protein; KEGG: ssn:SSO_4070 2.2e-24 frvA; PTS system, fructose-specific IIA component K02768; COG: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); Psort location: Cytoplasmic, score:8.96.
       0.757
ABX23422.1
Hypothetical protein; KEGG: ecs:ECs4825 2.2e-26 fructose-like PTS system enzyme IIBC component K02769:K02770; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: Cytoplasmic, score:9.26.
  
  
 0.714
ABX23424.1
Hypothetical protein; KEGG: sfl:SF3976 3.0e-36 frvB; PTS system, fructose-like enzyme IIBC component K02769:K02770; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: CytoplasmicMembrane, score:9.82.
  
  
 0.653
ABX23425.1
Hypothetical protein; KEGG: sfl:SF3976 1.9e-24 frvB; PTS system, fructose-like enzyme IIBC component K02769:K02770; COG: COG1299 Phosphotransferase system, fructose-specific IIC component.
  
  
 0.619
ABX23423.1
Hypothetical protein; COG: COG0795 Predicted permeases.
       0.576
ABX24086.1
COG: COG1544 Ribosome-associated protein Y (PSrp-1); Psort location: Cytoplasmic, score:8.96.
  
  
 0.555
rapZ
Hypothetical protein; Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6- phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E. Consequently, GlmZ is inactivated and unable to activate GlmS synthesis. Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS; Belongs to the RapZ-like family. RapZ subfamily.
  
  
 0.538
ABX23749.1
Hypothetical protein; KEGG: stm:STM3685 0. mtlA; PTS family, mannitol-specific enzyme IIABC components K02798:K02799:K02800; COG: COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 0.510
ABX23418.1
Hypothetical protein; COG: COG1296 Predicted branched-chain amino acid permease (azaleucine resistance); Psort location: CytoplasmicMembrane, score:10.00.
       0.456
ABX23419.1
Hypothetical protein; COG: NOG19750 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
       0.456
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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