STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX23718.1Hypothetical protein; KEGG: stm:STM3717 1.8e-171 rfaJ, waaJ; UDP-D-glucose:(galactosyl)lipopolysaccharide alpha-1,2-glucosyltransferase K03279; COG: COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases. (336 aa)    
Predicted Functional Partners:
ABX23716.1
Hypothetical protein; KEGG: sec:SC3642 3.5e-184 rfaB; UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase K02840; COG: COG0438 Glycosyltransferase.
  
 0.988
ABX23720.1
Hypothetical protein; COG: NOG06879 non supervised orthologous group.
 
  
 0.968
ABX23714.1
Hypothetical protein; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
 
  
 0.945
ABX23717.1
Hypothetical protein; KEGG: stt:t3801 1.1e-171 waaI; lipopolysaccharide 1,3-galactosyltransferase K03278; COG: COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases.
 
   
0.945
ABX23713.1
Hypothetical protein; KEGG: stm:STM3722 2.5e-197 rfaG, waaG; UDP-glucose:(heptosyl)lipopolysaccharide alpha-1,3-glucosyltransferase K02844; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score:8.96.
 
  
 0.938
ABX23719.1
Hypothetical protein; KEGG: stt:t3803 1.6e-115 waaY; lipopolysaccharide core biosynthesis protein K02850; COG: NOG10262 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
 
 0.928
ABX23722.1
Hypothetical protein; KEGG: sec:SC3636 2.3e-203 waaL; hypothetical protein K02847; COG: COG3307 Lipid A core - O-antigen ligase and related enzymes; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 0.901
ABX23712.1
Hypothetical protein; KEGG: sty:STY4071 8.9e-179 rfaQ, waaQ; lipopolysaccharide heptosyltransferase III K02849; COG: COG0859 ADP-heptose:LPS heptosyltransferase.
 
  
 0.739
ABX20977.1
Hypothetical protein; KEGG: psp:PSPPH_2956 0.00086 hydrolase, carbon-nitrogen family K01950; COG: COG0388 Predicted amidohydrolase.
  
     0.694
ABX24082.1
Hypothetical protein; COG: NOG06212 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
     0.693
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.