STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpCHypothetical protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (356 aa)    
Predicted Functional Partners:
ugpE
Hypothetical protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 0.997
ABX23868.1
Hypothetical protein; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.992
ABX23867.1
Hypothetical protein; KEGG: eci:UTI89_C1581 2.8e-09 ycjN; putative ABC transporter periplasmic binding protein YcjN precursor K02027; COG: COG1653 ABC-type sugar transport system, periplasmic component; Psort location: Periplasmic, score:10.00.
 
 0.990
ABX23282.1
Hypothetical protein; KEGG: cyb:CYB_0398 9.9e-10 modB; molybdate ABC transporter, permease protein K02018; COG: COG3833 ABC-type maltose transport systems, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.945
ABX23281.1
Hypothetical protein; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score:9.86.
 
 
 0.930
ABX21189.1
Hypothetical protein; COG: COG0395 ABC-type sugar transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.923
ABX21188.1
Hypothetical protein; KEGG: gvi:glr0748 0.00070 ndhC; NADH dehydrogenase subunit 3 K05574; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.918
ABX23871.1
Hypothetical protein; KEGG: stm:STM3553 1.0e-129 ugpQ; cytoplasmic glycerophosphodiester phosphodiesterase K01126; COG: COG0584 Glycerophosphoryl diester phosphodiesterase; Psort location: Cytoplasmic, score:9.97.
 
  
 0.918
ABX23279.1
Hypothetical protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.
 
 
 0.856
ABX21187.1
Hypothetical protein; KEGG: eci:UTI89_C1581 3.9e-201 ycjN; putative ABC transporter periplasmic binding protein YcjN precursor K02027; COG: COG1653 ABC-type sugar transport system, periplasmic component.
 
 
 0.724
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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