Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
garDHypothetical protein; Catalyzes the dehydration of galactarate to form 5-dehydro-4- deoxy-D-glucarate. (523 aa)    
Predicted Functional Partners:
ABX19956.1
Hypothetical protein; KEGG: sec:SC2900 8.7e-236 gudD; D-glucarate dehydratase K01706; COG: COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily.
 
 
 0.989
garL
Hypothetical protein; Catalyzes the reversible retro-aldol cleavage of both 5-keto- 4-deoxy-D-glucarate and 2-keto-3-deoxy-D-glucarate to pyruvate and tartronic semialdehyde; Belongs to the HpcH/HpaI aldolase family. KDGluc aldolase subfamily.
 
 
 0.970
ABX23738.1
Hypothetical protein; KEGG: stm:STM3697 6.7e-213 putative mandelate racemase / muconate lactonizing enzyme family K01781; COG: COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Psort location: Cytoplasmic, score:8.96.
 
  
 0.950
ABX19955.1
Hypothetical protein; KEGG: stm:STM2961 8.8e-243 ygcY; putative D-glucarate dehydratase K01706; COG: COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily.
 
  
 0.827
uxaC
Hypothetical protein; KEGG: spt:SPA3005 3.2e-254 uxaC; uronate isomerase (glucuronate isomerase) K01812; COG: COG1904 Glucuronate isomerase; Psort location: Cytoplasmic, score:8.96.
 
  
 0.783
ABX23737.1
Hypothetical protein; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.674
uxuA
Hypothetical protein; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family.
 
  
 0.614
kduI
Hypothetical protein; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
  
 0.591
garR
Hypothetical protein; Catalyzes the reduction of tatronate semialdehyde to D- glycerate; Belongs to the HIBADH-related family. 2-hydroxy-3- oxopropionate reductase subfamily.
 
  
 0.580
ABX24264.1
Hypothetical protein; KEGG: stt:t3057 1.1e-260 uxuB; D-mannonate oxidoreductase K00040; COG: COG0246 Mannitol-1-phosphate/altronate dehydrogenases; Psort location: Cytoplasmic, score:8.96.
 
  
 0.496
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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