Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABX24216.1Hypothetical protein; KEGG: vvy:VV2267 1.7e-122 glutathionylspermidine synthase K01917; COG: COG0754 Glutathionylspermidine synthase; Psort location: Cytoplasmic, score:8.96. (386 aa)    
Predicted Functional Partners:
ygiB
Hypothetical protein; COG: COG5463 Predicted integral membrane protein; Belongs to the UPF0441 family.
 
  
 0.988
ABX23095.1
COG: COG3766 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.46.
 
   0.736
ABX24218.1
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:10.00.
       0.439
ABX22334.1
Hypothetical protein; KEGG: sec:SC0500 1.1e-187 putative cysteine synthase/cystathionine beta-synthase K01738; COG: COG0031 Cysteine synthase; Psort location: Cytoplasmic, score:8.96.
  
     0.435
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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