Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABX24233.1 | ABX24234.1 | SARI_04458 | SARI_04459 | Hypothetical protein; KEGG: reh:H16_A0281 1.1e-13 diadenosine tetraphosphate (Ap4A) hydrolase K01518; COG: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases. | Hypothetical protein; KEGG: fnu:FN2030 0.00017 inorganic pyrophosphatase K01507; COG: COG0471 Di- and tricarboxylate transporters; Psort location: CytoplasmicMembrane, score:10.00. | 0.634 |
ABX24233.1 | ABX24235.1 | SARI_04458 | SARI_04460 | Hypothetical protein; KEGG: reh:H16_A0281 1.1e-13 diadenosine tetraphosphate (Ap4A) hydrolase K01518; COG: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases. | Hypothetical protein; KEGG: stm:STM3165 4.5e-145 yqhE; 2,5-diketo-D-gluconic acid reductase A K06221; COG: COG0656 Aldo/keto reductases, related to diketogulonate reductase; Psort location: Cytoplasmic, score:8.96. | 0.422 |
ABX24234.1 | ABX24233.1 | SARI_04459 | SARI_04458 | Hypothetical protein; KEGG: fnu:FN2030 0.00017 inorganic pyrophosphatase K01507; COG: COG0471 Di- and tricarboxylate transporters; Psort location: CytoplasmicMembrane, score:10.00. | Hypothetical protein; KEGG: reh:H16_A0281 1.1e-13 diadenosine tetraphosphate (Ap4A) hydrolase K01518; COG: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases. | 0.634 |
ABX24234.1 | ABX24235.1 | SARI_04459 | SARI_04460 | Hypothetical protein; KEGG: fnu:FN2030 0.00017 inorganic pyrophosphatase K01507; COG: COG0471 Di- and tricarboxylate transporters; Psort location: CytoplasmicMembrane, score:10.00. | Hypothetical protein; KEGG: stm:STM3165 4.5e-145 yqhE; 2,5-diketo-D-gluconic acid reductase A K06221; COG: COG0656 Aldo/keto reductases, related to diketogulonate reductase; Psort location: Cytoplasmic, score:8.96. | 0.449 |
ABX24235.1 | ABX24233.1 | SARI_04460 | SARI_04458 | Hypothetical protein; KEGG: stm:STM3165 4.5e-145 yqhE; 2,5-diketo-D-gluconic acid reductase A K06221; COG: COG0656 Aldo/keto reductases, related to diketogulonate reductase; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; KEGG: reh:H16_A0281 1.1e-13 diadenosine tetraphosphate (Ap4A) hydrolase K01518; COG: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases. | 0.422 |
ABX24235.1 | ABX24234.1 | SARI_04460 | SARI_04459 | Hypothetical protein; KEGG: stm:STM3165 4.5e-145 yqhE; 2,5-diketo-D-gluconic acid reductase A K06221; COG: COG0656 Aldo/keto reductases, related to diketogulonate reductase; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; KEGG: fnu:FN2030 0.00017 inorganic pyrophosphatase K01507; COG: COG0471 Di- and tricarboxylate transporters; Psort location: CytoplasmicMembrane, score:10.00. | 0.449 |