Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABX24242.1 | ABX24243.1 | SARI_04467 | SARI_04468 | Hypothetical protein; KEGG: sec:SC3099 2.4e-153 yghA; putative oxidoreductase; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score:9.26. | Hypothetical protein; COG: NOG30084 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96. | 0.500 |
ABX24242.1 | ABX24244.1 | SARI_04467 | SARI_04469 | Hypothetical protein; KEGG: sec:SC3099 2.4e-153 yghA; putative oxidoreductase; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score:9.26. | Hypothetical protein; COG: NOG27696 non supervised orthologous group. | 0.500 |
ABX24243.1 | ABX24242.1 | SARI_04468 | SARI_04467 | Hypothetical protein; COG: NOG30084 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; KEGG: sec:SC3099 2.4e-153 yghA; putative oxidoreductase; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score:9.26. | 0.500 |
ABX24243.1 | ABX24244.1 | SARI_04468 | SARI_04469 | Hypothetical protein; COG: NOG30084 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; COG: NOG27696 non supervised orthologous group. | 0.838 |
ABX24243.1 | ABX24245.1 | SARI_04468 | SARI_04470 | Hypothetical protein; COG: NOG30084 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; Psort location: Cytoplasmic, score:8.96. | 0.567 |
ABX24244.1 | ABX24242.1 | SARI_04469 | SARI_04467 | Hypothetical protein; COG: NOG27696 non supervised orthologous group. | Hypothetical protein; KEGG: sec:SC3099 2.4e-153 yghA; putative oxidoreductase; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score:9.26. | 0.500 |
ABX24244.1 | ABX24243.1 | SARI_04469 | SARI_04468 | Hypothetical protein; COG: NOG27696 non supervised orthologous group. | Hypothetical protein; COG: NOG30084 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96. | 0.838 |
ABX24244.1 | ABX24245.1 | SARI_04469 | SARI_04470 | Hypothetical protein; COG: NOG27696 non supervised orthologous group. | Hypothetical protein; Psort location: Cytoplasmic, score:8.96. | 0.567 |
ABX24245.1 | ABX24243.1 | SARI_04470 | SARI_04468 | Hypothetical protein; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; COG: NOG30084 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96. | 0.567 |
ABX24245.1 | ABX24244.1 | SARI_04470 | SARI_04469 | Hypothetical protein; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; COG: NOG27696 non supervised orthologous group. | 0.567 |