STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX24250.1Hypothetical protein; KEGG: eci:UTI89_C3418 6.3e-178 hybA; hydrogenase-2 operon protein HybA precursor K00396; COG: COG0437 Fe-S-cluster-containing hydrogenase components 1; Psort location: Periplasmic, score:10.00. (328 aa)    
Predicted Functional Partners:
ABX24251.1
Hypothetical protein; KEGG: eci:UTI89_C3417 8.5e-206 hybB; probable Ni/Fe-hydrogenase 2 B-type cytochrome subunit K00178; COG: COG5557 Polysulphide reductase; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.997
ABX24249.1
Hypothetical protein; KEGG: sty:STY3321 2.8e-207 hyb0; hydrogenase small chain K06282; COG: COG1740 Ni,Fe-hydrogenase I small subunit; Psort location: Periplasmic, score:9.76.
 
  
 0.979
ABX24252.1
Hypothetical protein; KEGG: sec:SC3088 0. hybC; hydrogenase-2, large subunit K06281; COG: COG0374 Ni,Fe-hydrogenase I large subunit; Psort location: Periplasmic, score:9.44; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
  
 0.966
ABX24254.1
Hypothetical protein; COG: NOG08099 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
    0.931
ABX24253.1
Hypothetical protein; KEGG: spt:SPA3014 1.2e-80 hybD; hydrogenase-2 component protein K08567; COG: COG0680 Ni,Fe-hydrogenase maturation factor; Psort location: Cytoplasmic, score:8.96.
 
  
 0.924
hybF
Hypothetical protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
  
    0.826
ABX24256.1
Hypothetical protein; COG: COG0298 Hydrogenase maturation factor; Psort location: Cytoplasmic, score:8.96.
  
  
 0.712
ABX23443.1
Hypothetical protein; KEGG: sec:SC3925 1.5e-114 fdoI; formate dehydrogenase, cytochrome b556 (FDO) subunit K00127; COG: COG2864 Cytochrome b subunit of formate dehydrogenase; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.708
ABX20073.1
Hypothetical protein; KEGG: eci:UTI89_C3087 5.8e-88 hycB; formate hydrogenlyase subunit 2; COG: COG1142 Fe-S-cluster-containing hydrogenase components 2; Psort location: Cytoplasmic, score:8.96.
  
     0.626
ABX21493.1
Hypothetical protein; KEGG: afu:AF0159 6.0e-95 molybdopterin oxidoreductase, molybdopterin binding subunit K00183; COG: COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
   0.601
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.