STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX24267.1Hypothetical protein. (60 aa)    
Predicted Functional Partners:
uxuA
Hypothetical protein; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family.
       0.643
ABX24266.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
       0.572
ABX24264.1
Hypothetical protein; KEGG: stt:t3057 1.1e-260 uxuB; D-mannonate oxidoreductase K00040; COG: COG0246 Mannitol-1-phosphate/altronate dehydrogenases; Psort location: Cytoplasmic, score:8.96.
       0.427
uxaC
Hypothetical protein; KEGG: spt:SPA3005 3.2e-254 uxaC; uronate isomerase (glucuronate isomerase) K01812; COG: COG1904 Glucuronate isomerase; Psort location: Cytoplasmic, score:8.96.
       0.414
ABX24262.1
Hypothetical protein.
       0.405
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.