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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX24271.1Hypothetical protein; KEGG: rha:RHA1_ro03918 1.5e-13 probable formamidase K01455; COG: COG0388 Predicted amidohydrolase. (292 aa)    
Predicted Functional Partners:
ABX24272.1
Hypothetical protein; KEGG: hpa:HPAG1_0312 1.2e-50 hypothetical protein K01463; COG: COG0726 Predicted xylanase/chitin deacetylase.
 
    0.842
ABX21616.1
Hypothetical protein; COG: NOG18515 non supervised orthologous group.
  
     0.486
ABX23246.1
Hypothetical protein; KEGG: mmr:Mmar10_2493 2.1e-21 serralysin K01406; COG: NOG39362 non supervised orthologous group.
  
     0.441
guaA
Hypothetical protein; Catalyzes the synthesis of GMP from XMP.
   
 
 0.438
ABX21458.1
Hypothetical protein; COG: COG1886 Flagellar motor switch/type III secretory pathway protein; Psort location: Cytoplasmic, score:8.96.
  
     0.436
ABX24270.1
Hypothetical protein.
       0.425
purL
Hypothetical protein; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
  
  
 0.418
ABX21215.1
KEGG: sha:SH0507 0.0094 hypothetical protein K00567; COG: NOG08628 non supervised orthologous group; Psort location: OuterMembrane, score:10.00.
  
     0.410
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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