STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX24340.1Hypothetical protein; COG: COG3722 Transcriptional regulator. (169 aa)    
Predicted Functional Partners:
ABX21488.1
Hypothetical protein; COG: NOG13889 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
     
 0.913
ABX24341.1
Hypothetical protein; KEGG: eci:UTI89_C3316 1.7e-88 yggC; hypothetical protein YggC K00867; COG: COG1072 Panthothenate kinase; Psort location: Cytoplasmic, score:8.96.
 
     0.908
ABX20347.1
Hypothetical protein; KEGG: sty:STY2709 0. maeB; NADP-dependent malate dehydrogenase (decarboxylating) K00029; COG: COG0280 Phosphotransacetylase.
     
  0.900
maeA
Hypothetical protein; KEGG: spt:SPA1302 0. sfcA; NAD-linked malic enzyme; malate oxidoreductase K00027; COG: COG0281 Malic enzyme; Belongs to the malic enzymes family.
     
  0.900
fumC
Hypothetical protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
     
  0.900
ABX21406.1
Hypothetical protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
  0.900
ABX22077.1
Hypothetical protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
  0.900
ABX23179.1
Hypothetical protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
  0.900
ABX23302.1
Hypothetical protein; KEGG: stm:STM4183 4.6e-285 aceB; malate synthase A K01638; COG: COG2225 Malate synthase; Psort location: Cytoplasmic, score:9.97.
     
  0.900
mdh
Hypothetical protein; Catalyzes the reversible oxidation of malate to oxaloacetate.
     
  0.900
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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