STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argOHypothetical protein; Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine; Belongs to the LysE/ArgO transporter (TC 2.A.75) family. (197 aa)    
Predicted Functional Partners:
argP
Hypothetical protein; Controls the transcription of genes involved in arginine and lysine metabolism; Belongs to the LysR transcriptional regulatory family.
 
   
 0.958
yidE
Hypothetical protein; COG: COG2985 Predicted permease; Psort location: CytoplasmicMembrane, score:10.00.
      
 0.807
ABX21600.1
Hypothetical protein; COG: COG1280 Putative threonine efflux protein; Psort location: CytoplasmicMembrane, score:9.46.
  
   
 0.686
ABX24353.1
Hypothetical protein; COG: COG2968 Uncharacterized conserved protein; Psort location: Periplasmic, score:9.76.
       0.647
ABX21219.1
Hypothetical protein; COG: COG3382 Uncharacterized conserved protein.
  
    0.512
ABX22417.1
Hypothetical protein; COG: COG1280 Putative threonine efflux protein; Psort location: CytoplasmicMembrane, score:10.00.
  
   
 0.512
ABX24351.1
Hypothetical protein; COG: COG0668 Small-conductance mechanosensitive channel; Psort location: CytoplasmicMembrane, score:10.00.
     
 0.435
ABX24354.1
Hypothetical protein; KEGG: shn:Shewana3_3435 6.4e-11 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.26; Belongs to the LysR transcriptional regulatory family.
       0.415
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.