Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABX24429.1Hypothetical protein; COG: COG4795 Type II secretory pathway, component PulJ. (183 aa)    
Predicted Functional Partners:
ABX24427.1
Hypothetical protein; COG: COG2165 Type II secretory pathway, pseudopilin PulG.
 
 
 0.997
ABX24430.1
Hypothetical protein; COG: NOG10274 non supervised orthologous group.
  
  
 0.919
ABX23853.1
Hypothetical protein; COG: NOG09778 non supervised orthologous group.
  
     0.772
ABX22699.1
Hypothetical protein; KEGG: pen:PSEEN2333 2.5e-80 xcpR-2; type II secretion pathway protein E K01509; COG: COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; Psort location: Cytoplasmic, score:9.97.
     
 0.743
ABX22210.1
Hypothetical protein; COG: COG3765 Chain length determinant protein; Psort location: CytoplasmicMembrane, score:9.82.
  
     0.684
ABX20725.1
Hypothetical protein; KEGG: rsp:RSP_4084 1.3e-06 predicted acetyltransferase K00903; COG: COG3765 Chain length determinant protein; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.673
ABX20252.1
Hypothetical protein; COG: NOG06210 non supervised orthologous group.
  
     0.658
tsgA
Hypothetical protein; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.658
ABX22698.1
COG: COG4969 Tfp pilus assembly protein, major pilin PilA; Belongs to the N-Me-Phe pilin family.
 
   
 0.655
ABX24428.1
Hypothetical protein.
       0.632
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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