Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABX24461.1Hypothetical protein; KEGG: shn:Shewana3_2825 8.1e-11 dTDP-4-dehydrorhamnose 3,5-epimerase K01790; COG: COG3098 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.96. (109 aa)    
Predicted Functional Partners:
ABX24462.1
Hypothetical protein; KEGG: sec:SC2904 1.2e-137 yqcB; putative synthase K06175; COG: COG0564 Pseudouridylate synthases, 23S RNA-specific; Psort location: Cytoplasmic, score:8.96.
  
  
 0.882
ABX24463.1
Hypothetical protein; KEGG: bsu:BG14100 1.2e-12 yvgR; sulfite reductase (NADPH) flavoprotein alpha-component K00380; COG: COG0716 Flavodoxins.
       0.768
ABX20652.1
Hypothetical protein; COG: NOG06773 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.516
ABX23423.1
Hypothetical protein; COG: COG0795 Predicted permeases.
  
     0.463
nfuA
Hypothetical protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
  
     0.440
ABX20438.1
Hypothetical protein; KEGG: sty:STY2619 1.7e-81 phosphohistidine phosphatase K08296; COG: COG2062 Phosphohistidine phosphatase SixA; Psort location: Cytoplasmic, score:8.96.
  
     0.428
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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