STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI38510.1Protein involved in gliding motility GldH. (162 aa)    
Predicted Functional Partners:
SHI38491.1
Penicillin-binding protein 1A.
       0.837
SHI38540.1
Cell fate regulator YaaT, PSP1 superfamily (controls sporulation, competence, biofilm development).
       0.837
SHI75520.1
Protein involved in gliding motility GldB.
  
   
 0.730
SHI74270.1
Protein involved in gliding motility GldK.
  
   
 0.721
SHI46629.1
Protein involved in gliding motility GldD.
  
   
 0.712
SHI74190.1
Protein involved in gliding motility GldN.
  
   
 0.683
SHJ04141.1
Protein involved in gliding motility GldJ.
  
   
 0.679
SHI60849.1
Protein involved in gliding motility GldG.
  
   
 0.675
SHI38603.1
Sporulation related domain-containing protein.
 
     0.650
SHI88749.1
Outer membrane lipoprotein-sorting protein.
  
     0.631
Your Current Organism:
Flavobacterium terrae
NCBI taxonomy Id: 415425
Other names: DSM 18829, F. terrae, Flavobacterium terrae Weon et al. 2007 emend. Sheu et al. 2013, KACC 11731, strain R2A1-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.