STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbut_0159L(+)-tartrate dehydratase class I, alpha subunit. (294 aa)    
Predicted Functional Partners:
Hbut_0158
L(+)-tartrate dehydratase beta subunit.
 
 0.999
Hbut_0154
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
  
 
 0.984
Hbut_0157
Succinate dehydrogenase/fumarate reductase iron-sulfur protein.
  
 
 0.983
Hbut_0155
Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
  
 
 0.971
Hbut_0156
Hypothetical protein; Weak hit A. pernix, could be linked to gid1850 - check.
  
 
 0.960
Hbut_0153
Malic enzyme.
  
 
 0.930
Hbut_1053
Formate dehydrogenase, cytochrome b.
  
  
  0.823
Hbut_0304
Argininosuccinate lyase.
    
 0.820
Hbut_1051
Anaerobic dehydrogenases, typically selenocysteine-containing.
     
 0.809
Hbut_1044
Aspartate aminotransferase.
    
  0.804
Your Current Organism:
Hyperthermus butylicus
NCBI taxonomy Id: 415426
Other names: H. butylicus DSM 5456, Hyperthermus butylicus DSM 5456, Hyperthermus butylicus str. DSM 5456, Hyperthermus butylicus strain DSM 5456
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.