Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Hbut_0038 | Hbut_0411 | Hbut_0038 | Hbut_0411 | 5-formyltetrahydrofolate cyclo-ligase. | Uncharacterized membrane protein. | 0.774 |
Hbut_0264 | Hbut_0411 | Hbut_0264 | Hbut_0411 | Sec-independent secretion pathway protein. | Uncharacterized membrane protein. | 0.640 |
Hbut_0264 | tatA | Hbut_0264 | Hbut_1509 | Sec-independent secretion pathway protein. | mttA/Hcf106; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.903 |
Hbut_0297 | Hbut_0411 | Hbut_0297 | Hbut_0411 | Hypothetical protein. | Uncharacterized membrane protein. | 0.467 |
Hbut_0409 | Hbut_0410 | Hbut_0409 | Hbut_0410 | Predicted Zn-dependent protease, TldD. | Predicted Zn-dependent protease, TldD. | 0.817 |
Hbut_0409 | Hbut_0411 | Hbut_0409 | Hbut_0411 | Predicted Zn-dependent protease, TldD. | Uncharacterized membrane protein. | 0.419 |
Hbut_0410 | Hbut_0409 | Hbut_0410 | Hbut_0409 | Predicted Zn-dependent protease, TldD. | Predicted Zn-dependent protease, TldD. | 0.817 |
Hbut_0410 | Hbut_0411 | Hbut_0410 | Hbut_0411 | Predicted Zn-dependent protease, TldD. | Uncharacterized membrane protein. | 0.581 |
Hbut_0411 | Hbut_0038 | Hbut_0411 | Hbut_0038 | Uncharacterized membrane protein. | 5-formyltetrahydrofolate cyclo-ligase. | 0.774 |
Hbut_0411 | Hbut_0264 | Hbut_0411 | Hbut_0264 | Uncharacterized membrane protein. | Sec-independent secretion pathway protein. | 0.640 |
Hbut_0411 | Hbut_0297 | Hbut_0411 | Hbut_0297 | Uncharacterized membrane protein. | Hypothetical protein. | 0.467 |
Hbut_0411 | Hbut_0409 | Hbut_0411 | Hbut_0409 | Uncharacterized membrane protein. | Predicted Zn-dependent protease, TldD. | 0.419 |
Hbut_0411 | Hbut_0410 | Hbut_0411 | Hbut_0410 | Uncharacterized membrane protein. | Predicted Zn-dependent protease, TldD. | 0.581 |
Hbut_0411 | Hbut_0738 | Hbut_0411 | Hbut_0738 | Uncharacterized membrane protein. | Hypothetical protein. | 0.645 |
Hbut_0411 | Hbut_0739 | Hbut_0411 | Hbut_0739 | Uncharacterized membrane protein. | Hypothetical protein. | 0.645 |
Hbut_0411 | Hbut_1010 | Hbut_0411 | Hbut_1010 | Uncharacterized membrane protein. | Predicted membrane protein. | 0.645 |
Hbut_0411 | srp54 | Hbut_0411 | Hbut_1662 | Uncharacterized membrane protein. | Signal recognition particle GTPase; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.416 |
Hbut_0411 | tatA | Hbut_0411 | Hbut_1509 | Uncharacterized membrane protein. | mttA/Hcf106; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.640 |
Hbut_0738 | Hbut_0411 | Hbut_0738 | Hbut_0411 | Hypothetical protein. | Uncharacterized membrane protein. | 0.645 |
Hbut_0738 | Hbut_0739 | Hbut_0738 | Hbut_0739 | Hypothetical protein. | Hypothetical protein. | 0.507 |
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