STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ribKHypothetical protein; Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN); Belongs to the archaeal riboflavin kinase family. (149 aa)    
Predicted Functional Partners:
Hbut_0060
Cytidylyl transferase, TagD; Includes extra conserved archaeal domain.
  
  
 0.937
Hbut_0559
Riboflavin synthase.
    
  0.910
Hbut_1016
Predicted Nitroreductase.
     
  0.900
Hbut_0507
Biotin synthase-related enzyme.
 
     0.807
Hbut_0508
Hypothetical protein.
 
     0.807
Hbut_0505
Phosphoglycolate phosphatase; Catalyzes the dephosphorylation of 2-phosphoglycolate.
       0.777
Hbut_0504
Hypothetical protein.
       0.645
Hbut_0351
Formaldehyde:ferredoxin oxidoreductase.
       0.538
rbcL
Ribulose bisphosphate carboxylase; Catalyzes the addition of molecular CO(2) and H(2)O to ribulose 1,5-bisphosphate (RuBP), generating two molecules of 3- phosphoglycerate (3-PGA). Functions in an archaeal AMP degradation pathway, together with AMP phosphorylase and R15P isomerase. Belongs to the RuBisCO large chain family. Type III subfamily.
       0.467
Hbut_0479
Translin family, DNA-binding protein; Contains DNA/RNA binding domain(s).
     
 0.438
Your Current Organism:
Hyperthermus butylicus
NCBI taxonomy Id: 415426
Other names: H. butylicus DSM 5456, Hyperthermus butylicus DSM 5456, Hyperthermus butylicus str. DSM 5456, Hyperthermus butylicus strain DSM 5456
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