STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ59314.1Tripartite ATP-independent transporter solute receptor, DctP family. (721 aa)    
Predicted Functional Partners:
SCZ58506.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
  
 0.895
SCZ49957.1
Predicted ferric reductase.
  
    0.814
SCZ62174.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 
 0.812
SCZ52811.1
Predicted ferric reductase.
   
    0.785
SCZ65051.1
TRAP transporter, DctM subunit.
 
     0.775
SCZ59320.1
Diguanylate cyclase (GGDEF) domain-containing protein.
       0.773
SCZ55029.1
Riboflavin synthase alpha chain.
  
    0.722
rpmE
Large subunit ribosomal protein L31; Binds the 23S rRNA.
  
    0.682
SCZ65047.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
     0.656
SCZ52849.1
Hypothetical protein.
  
 
 0.610
Your Current Organism:
Thiohalomonas denitrificans
NCBI taxonomy Id: 415747
Other names: DSM 15841, T. denitrificans, Thiohalomonas denitrificans Sorokin et al. 2007, UNIQEM U222, halophilic bacterium HLD 1, halophilic bacterium HLD 16, strain HLD 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.