STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ59762.1tRNA 2-thiouridine synthesizing protein C; Belongs to the DsrF/TusC family. (122 aa)    
Predicted Functional Partners:
SCZ59758.1
tRNA 2-thiouridine synthesizing protein D.
 
 0.999
SCZ59768.1
tRNA 2-thiouridine synthesizing protein B.
 
 0.999
SCZ58330.1
Uncharacterized protein involved in oxidation of intracellular sulfur.
  
 0.968
SCZ59772.1
tRNA 2-thiouridine synthesizing protein E; Part of a sulfur-relay system.
 
  
 0.927
SCZ59752.1
Dissimilatory sulfite reductase beta subunit.
 
   
 0.890
SCZ59777.1
Nitrate reductase gamma subunit.
 
   
 0.875
SCZ59782.1
Fe-S oxidoreductase.
 
   
 0.860
SCZ59791.1
Hypothetical protein.
 
   
 0.839
SCZ59802.1
Prokaryotic molybdopterin-containing oxidoreductase family, membrane subunit.
 
     0.820
SCZ59745.1
Dissimilatory sulfite reductase alpha subunit.
 
     0.818
Your Current Organism:
Thiohalomonas denitrificans
NCBI taxonomy Id: 415747
Other names: DSM 15841, T. denitrificans, Thiohalomonas denitrificans Sorokin et al. 2007, UNIQEM U222, halophilic bacterium HLD 1, halophilic bacterium HLD 16, strain HLD 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.