STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ59821.1Two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX. (549 aa)    
Predicted Functional Partners:
SCZ59826.1
Two component transcriptional regulator, LuxR family.
 0.982
SCZ63491.1
Two component transcriptional regulator, LuxR family.
 0.970
SCZ58506.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
  
 
 0.924
SCZ49610.1
Two-component system, unclassified family, sensor histidine kinase and response regulator.
  
 
 0.903
SCZ52849.1
Hypothetical protein.
  
 
 0.865
SCZ62200.1
PAS domain S-box-containing protein.
  
 
 0.865
SCZ59664.1
Two component transcriptional regulator, LuxR family.
 0.862
SCZ63487.1
Two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX.
  
  
 
0.856
SCZ57453.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 
 0.852
SCZ62206.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 
 0.852
Your Current Organism:
Thiohalomonas denitrificans
NCBI taxonomy Id: 415747
Other names: DSM 15841, T. denitrificans, Thiohalomonas denitrificans Sorokin et al. 2007, UNIQEM U222, halophilic bacterium HLD 1, halophilic bacterium HLD 16, strain HLD 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.