STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ61555.1UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase. (350 aa)    
Predicted Functional Partners:
SCZ61550.1
UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase.
   
 0.980
SCZ61538.1
UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.965
SCZ55922.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.882
SCZ55999.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.879
SCZ61452.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.843
SCZ55862.1
UDP-N-acetyl-D-galactosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.825
SCZ61544.1
Glycerol-3-phosphate dehydrogenase.
 
   
 0.821
SCZ52492.1
NADH dehydrogenase.
   
 
 0.793
lysS
lysyl-tRNA synthetase, class II; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.758
SCZ52821.1
Hypothetical protein.
    
  0.754
Your Current Organism:
Thiohalomonas denitrificans
NCBI taxonomy Id: 415747
Other names: DSM 15841, T. denitrificans, Thiohalomonas denitrificans Sorokin et al. 2007, UNIQEM U222, halophilic bacterium HLD 1, halophilic bacterium HLD 16, strain HLD 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.