STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ63301.1Cytochrome c. (141 aa)    
Predicted Functional Partners:
SCZ60339.1
Cytochrome c oxidase subunit 2.
 
 0.986
SCZ49123.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.886
SCZ57433.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.854
SCZ63314.1
Glycine/D-amino acid oxidase.
  
 0.837
SCZ66317.1
Cytochrome c oxidase cbb3-type subunit 3.
   
 0.829
SCZ50524.1
Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.781
SCZ60923.1
Cytochrome c oxidase cbb3-type subunit 2.
  
 0.767
SCZ60926.1
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 0.757
SCZ52164.1
Cytochrome c oxidase subunit 3.
  
  0.680
SCZ58171.1
Nitric oxide reductase NorE protein.
  
  0.680
Your Current Organism:
Thiohalomonas denitrificans
NCBI taxonomy Id: 415747
Other names: DSM 15841, T. denitrificans, Thiohalomonas denitrificans Sorokin et al. 2007, UNIQEM U222, halophilic bacterium HLD 1, halophilic bacterium HLD 16, strain HLD 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.