Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SCZ49610.1 | SCZ50619.1 | SAMN03097708_00209 | SAMN03097708_00459 | Two-component system, unclassified family, sensor histidine kinase and response regulator. | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.889 |
| SCZ49610.1 | SCZ52518.1 | SAMN03097708_00209 | SAMN03097708_00761 | Two-component system, unclassified family, sensor histidine kinase and response regulator. | PAS domain S-box-containing protein. | 0.998 |
| SCZ49610.1 | SCZ52849.1 | SAMN03097708_00209 | SAMN03097708_00818 | Two-component system, unclassified family, sensor histidine kinase and response regulator. | Hypothetical protein. | 0.999 |
| SCZ49610.1 | SCZ54714.1 | SAMN03097708_00209 | SAMN03097708_01015 | Two-component system, unclassified family, sensor histidine kinase and response regulator. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
| SCZ49610.1 | SCZ57453.1 | SAMN03097708_00209 | SAMN03097708_01431 | Two-component system, unclassified family, sensor histidine kinase and response regulator. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.999 |
| SCZ49610.1 | SCZ58506.1 | SAMN03097708_00209 | SAMN03097708_01729 | Two-component system, unclassified family, sensor histidine kinase and response regulator. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.999 |
| SCZ49610.1 | SCZ59675.1 | SAMN03097708_00209 | SAMN03097708_01905 | Two-component system, unclassified family, sensor histidine kinase and response regulator. | Two component transcriptional regulator, LuxR family. | 0.927 |
| SCZ49610.1 | SCZ62200.1 | SAMN03097708_00209 | SAMN03097708_02275 | Two-component system, unclassified family, sensor histidine kinase and response regulator. | PAS domain S-box-containing protein. | 0.999 |
| SCZ49610.1 | SCZ62206.1 | SAMN03097708_00209 | SAMN03097708_02276 | Two-component system, unclassified family, sensor histidine kinase and response regulator. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.999 |
| SCZ49610.1 | SCZ63651.1 | SAMN03097708_00209 | SAMN03097708_02522 | Two-component system, unclassified family, sensor histidine kinase and response regulator. | Regulatory protein, Fis family. | 0.877 |
| SCZ50619.1 | SCZ49610.1 | SAMN03097708_00459 | SAMN03097708_00209 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component system, unclassified family, sensor histidine kinase and response regulator. | 0.889 |
| SCZ50619.1 | SCZ52518.1 | SAMN03097708_00459 | SAMN03097708_00761 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PAS domain S-box-containing protein. | 0.421 |
| SCZ50619.1 | SCZ52849.1 | SAMN03097708_00459 | SAMN03097708_00818 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein. | 0.819 |
| SCZ50619.1 | SCZ54714.1 | SAMN03097708_00459 | SAMN03097708_01015 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.907 |
| SCZ50619.1 | SCZ57453.1 | SAMN03097708_00459 | SAMN03097708_01431 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.596 |
| SCZ50619.1 | SCZ58506.1 | SAMN03097708_00459 | SAMN03097708_01729 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.873 |
| SCZ50619.1 | SCZ62200.1 | SAMN03097708_00459 | SAMN03097708_02275 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PAS domain S-box-containing protein. | 0.819 |
| SCZ50619.1 | SCZ62206.1 | SAMN03097708_00459 | SAMN03097708_02276 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.596 |
| SCZ50619.1 | SCZ63651.1 | SAMN03097708_00459 | SAMN03097708_02522 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Regulatory protein, Fis family. | 0.875 |
| SCZ52518.1 | SCZ49610.1 | SAMN03097708_00761 | SAMN03097708_00209 | PAS domain S-box-containing protein. | Two-component system, unclassified family, sensor histidine kinase and response regulator. | 0.998 |
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