Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHO71989.1 | SHO71990.1 | SAMN05443547_0311 | SAMN05443547_0312 | Murein L,D-transpeptidase YcbB/YkuD. | L,D-transpeptidase catalytic domain. | 0.597 |
| SHO71989.1 | mtgA | SAMN05443547_0311 | SAMN05443547_0998 | Murein L,D-transpeptidase YcbB/YkuD. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.640 |
| SHO71990.1 | SHO71989.1 | SAMN05443547_0312 | SAMN05443547_0311 | L,D-transpeptidase catalytic domain. | Murein L,D-transpeptidase YcbB/YkuD. | 0.597 |
| SHO71990.1 | SHO71991.1 | SAMN05443547_0312 | SAMN05443547_0313 | L,D-transpeptidase catalytic domain. | Carbohydrate family 9 binding domain-like. | 0.499 |
| SHO71990.1 | SHO73072.1 | SAMN05443547_0312 | SAMN05443547_1422 | L,D-transpeptidase catalytic domain. | L,D-transpeptidase catalytic domain. | 0.492 |
| SHO71990.1 | SHO73376.1 | SAMN05443547_0312 | SAMN05443547_1733 | L,D-transpeptidase catalytic domain. | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.456 |
| SHO71990.1 | SHO73909.1 | SAMN05443547_0312 | SAMN05443547_2285 | L,D-transpeptidase catalytic domain. | Beta-glucosidase. | 0.461 |
| SHO71990.1 | mtgA | SAMN05443547_0312 | SAMN05443547_0998 | L,D-transpeptidase catalytic domain. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.506 |
| SHO71990.1 | murC | SAMN05443547_0312 | SAMN05443547_0278 | L,D-transpeptidase catalytic domain. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.482 |
| SHO71991.1 | SHO71990.1 | SAMN05443547_0313 | SAMN05443547_0312 | Carbohydrate family 9 binding domain-like. | L,D-transpeptidase catalytic domain. | 0.499 |
| SHO73072.1 | SHO71990.1 | SAMN05443547_1422 | SAMN05443547_0312 | L,D-transpeptidase catalytic domain. | L,D-transpeptidase catalytic domain. | 0.492 |
| SHO73072.1 | mtgA | SAMN05443547_1422 | SAMN05443547_0998 | L,D-transpeptidase catalytic domain. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.506 |
| SHO73376.1 | SHO71990.1 | SAMN05443547_1733 | SAMN05443547_0312 | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | L,D-transpeptidase catalytic domain. | 0.456 |
| SHO73376.1 | murC | SAMN05443547_1733 | SAMN05443547_0278 | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.413 |
| SHO73909.1 | SHO71990.1 | SAMN05443547_2285 | SAMN05443547_0312 | Beta-glucosidase. | L,D-transpeptidase catalytic domain. | 0.461 |
| SHO73909.1 | mtgA | SAMN05443547_2285 | SAMN05443547_0998 | Beta-glucosidase. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.570 |
| mtgA | SHO71989.1 | SAMN05443547_0998 | SAMN05443547_0311 | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | Murein L,D-transpeptidase YcbB/YkuD. | 0.640 |
| mtgA | SHO71990.1 | SAMN05443547_0998 | SAMN05443547_0312 | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | L,D-transpeptidase catalytic domain. | 0.506 |
| mtgA | SHO73072.1 | SAMN05443547_0998 | SAMN05443547_1422 | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | L,D-transpeptidase catalytic domain. | 0.506 |
| mtgA | SHO73909.1 | SAMN05443547_0998 | SAMN05443547_2285 | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | Beta-glucosidase. | 0.570 |
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