Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHO72100.1 | SHO72294.1 | SAMN05443547_0425 | SAMN05443547_0623 | Quinol:cytochrome c oxidoreductase quinone-binding subunit 2. | SM-20-related protein. | 0.784 |
SHO72292.1 | SHO72293.1 | SAMN05443547_0620 | SAMN05443547_0621 | SnoaL-like domain-containing protein. | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase. | 0.773 |
SHO72292.1 | SHO72294.1 | SAMN05443547_0620 | SAMN05443547_0623 | SnoaL-like domain-containing protein. | SM-20-related protein. | 0.500 |
SHO72293.1 | SHO72292.1 | SAMN05443547_0621 | SAMN05443547_0620 | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase. | SnoaL-like domain-containing protein. | 0.773 |
SHO72293.1 | SHO72294.1 | SAMN05443547_0621 | SAMN05443547_0623 | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase. | SM-20-related protein. | 0.594 |
SHO72294.1 | SHO72100.1 | SAMN05443547_0623 | SAMN05443547_0425 | SM-20-related protein. | Quinol:cytochrome c oxidoreductase quinone-binding subunit 2. | 0.784 |
SHO72294.1 | SHO72292.1 | SAMN05443547_0623 | SAMN05443547_0620 | SM-20-related protein. | SnoaL-like domain-containing protein. | 0.500 |
SHO72294.1 | SHO72293.1 | SAMN05443547_0623 | SAMN05443547_0621 | SM-20-related protein. | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase. | 0.594 |
SHO72294.1 | SHO72379.1 | SAMN05443547_0623 | SAMN05443547_0710 | SM-20-related protein. | Coproporphyrinogen oxidase. | 0.452 |
SHO72294.1 | SHO72974.1 | SAMN05443547_0623 | SAMN05443547_1323 | SM-20-related protein. | Beta-carotene 3-hydroxylase. | 0.483 |
SHO72294.1 | proC | SAMN05443547_0623 | SAMN05443547_2060 | SM-20-related protein. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.489 |
SHO72294.1 | pyrG | SAMN05443547_0623 | SAMN05443547_2058 | SM-20-related protein. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.412 |
SHO72294.1 | tuf | SAMN05443547_0623 | SAMN05443547_0176 | SM-20-related protein. | Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.784 |
SHO72379.1 | SHO72294.1 | SAMN05443547_0710 | SAMN05443547_0623 | Coproporphyrinogen oxidase. | SM-20-related protein. | 0.452 |
SHO72974.1 | SHO72294.1 | SAMN05443547_1323 | SAMN05443547_0623 | Beta-carotene 3-hydroxylase. | SM-20-related protein. | 0.483 |
proC | SHO72294.1 | SAMN05443547_2060 | SAMN05443547_0623 | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | SM-20-related protein. | 0.489 |
proC | pyrG | SAMN05443547_2060 | SAMN05443547_2058 | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.506 |
pyrG | SHO72294.1 | SAMN05443547_2058 | SAMN05443547_0623 | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | SM-20-related protein. | 0.412 |
pyrG | proC | SAMN05443547_2058 | SAMN05443547_2060 | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.506 |
tuf | SHO72294.1 | SAMN05443547_0176 | SAMN05443547_0623 | Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | SM-20-related protein. | 0.784 |