STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO72401.1Protein involved in gliding motility GldH. (165 aa)    
Predicted Functional Partners:
SHO72717.1
Protein involved in gliding motility GldD.
  
   
 0.814
SHO71971.1
Protein involved in gliding motility GldB.
  
   
 0.799
SHO73408.1
Protein involved in gliding motility GldJ.
  
   
 0.797
SHO72402.1
Cell fate regulator YaaT, PSP1 superfamily (controls sporulation, competence, biofilm development).
       0.796
SHO72400.1
Penicillin-binding protein 1A.
       0.795
SHO73780.1
Protein involved in gliding motility GldG.
  
   
 0.762
SHO72399.1
3-oxoacid CoA-transferase subunit A.
       0.758
SHO71919.1
Protein involved in gliding motility GldL.
  
   
 0.724
SHO71920.1
Protein involved in gliding motility GldK.
  
   
 0.709
SHO72332.1
Protein involved in gliding motility SprE.
  
     0.660
Your Current Organism:
Flavobacterium cucumis
NCBI taxonomy Id: 416016
Other names: DSM 18830, F. cucumis, Flavobacterium cucumis Weon et al. 2007, KACC 11732, strain R2A45-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.