STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO73377.1Hypothetical protein. (178 aa)    
Predicted Functional Partners:
SHO73376.1
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
  0.834
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
    
  0.833
SHO73871.1
LETM1-like protein.
  
     0.740
SHO72151.1
Protein of unknown function; Manually curated.
  
     0.703
SHO74083.1
Hypothetical protein.
  
     0.701
SHO71779.1
Hypothetical protein.
  
     0.671
SHO72699.1
Hypothetical protein.
  
     0.627
SHO72255.1
Hypothetical protein.
  
     0.601
SHO72996.1
Protein of unknown function.
  
     0.597
SHO74211.1
Hypothetical protein.
  
     0.579
Your Current Organism:
Flavobacterium cucumis
NCBI taxonomy Id: 416016
Other names: DSM 18830, F. cucumis, Flavobacterium cucumis Weon et al. 2007, KACC 11732, strain R2A45-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.