Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHO71772.1 | SHO73694.1 | SAMN05443547_0082 | SAMN05443547_2062 | Lipocalin-like domain-containing protein. | Peroxiredoxin. | 0.488 |
SHO73694.1 | SHO71772.1 | SAMN05443547_2062 | SAMN05443547_0082 | Peroxiredoxin. | Lipocalin-like domain-containing protein. | 0.488 |
SHO73694.1 | SHO73695.1 | SAMN05443547_2062 | SAMN05443547_2063 | Peroxiredoxin. | Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.551 |
SHO73694.1 | trpF | SAMN05443547_2062 | SAMN05443547_2026 | Peroxiredoxin. | Phosphoribosylanthranilate isomerase; Manually curated; Belongs to the TrpF family. | 0.628 |
SHO73695.1 | SHO73694.1 | SAMN05443547_2063 | SAMN05443547_2062 | Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Peroxiredoxin. | 0.551 |
trpF | SHO73694.1 | SAMN05443547_2026 | SAMN05443547_2062 | Phosphoribosylanthranilate isomerase; Manually curated; Belongs to the TrpF family. | Peroxiredoxin. | 0.628 |