Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHO73096.1 | SHO73698.1 | SAMN05443547_1447 | SAMN05443547_2066 | Methyltransferase domain-containing protein. | Methyltransferase domain-containing protein. | 0.400 |
SHO73696.1 | SHO73697.1 | SAMN05443547_2064 | SAMN05443547_2065 | Transcriptional regulator, ArsR family. | Hypothetical protein. | 0.704 |
SHO73696.1 | SHO73698.1 | SAMN05443547_2064 | SAMN05443547_2066 | Transcriptional regulator, ArsR family. | Methyltransferase domain-containing protein. | 0.434 |
SHO73696.1 | SHO73699.1 | SAMN05443547_2064 | SAMN05443547_2067 | Transcriptional regulator, ArsR family. | Chromate transporter. | 0.467 |
SHO73696.1 | SHO73700.1 | SAMN05443547_2064 | SAMN05443547_2068 | Transcriptional regulator, ArsR family. | Arsenate reductase. | 0.517 |
SHO73696.1 | SHO73701.1 | SAMN05443547_2064 | SAMN05443547_2069 | Transcriptional regulator, ArsR family. | Arsenite transporter, ACR3 family. | 0.559 |
SHO73697.1 | SHO73696.1 | SAMN05443547_2065 | SAMN05443547_2064 | Hypothetical protein. | Transcriptional regulator, ArsR family. | 0.704 |
SHO73697.1 | SHO73698.1 | SAMN05443547_2065 | SAMN05443547_2066 | Hypothetical protein. | Methyltransferase domain-containing protein. | 0.491 |
SHO73697.1 | SHO73699.1 | SAMN05443547_2065 | SAMN05443547_2067 | Hypothetical protein. | Chromate transporter. | 0.493 |
SHO73697.1 | SHO73700.1 | SAMN05443547_2065 | SAMN05443547_2068 | Hypothetical protein. | Arsenate reductase. | 0.877 |
SHO73697.1 | SHO73701.1 | SAMN05443547_2065 | SAMN05443547_2069 | Hypothetical protein. | Arsenite transporter, ACR3 family. | 0.614 |
SHO73698.1 | SHO73096.1 | SAMN05443547_2066 | SAMN05443547_1447 | Methyltransferase domain-containing protein. | Methyltransferase domain-containing protein. | 0.400 |
SHO73698.1 | SHO73696.1 | SAMN05443547_2066 | SAMN05443547_2064 | Methyltransferase domain-containing protein. | Transcriptional regulator, ArsR family. | 0.434 |
SHO73698.1 | SHO73697.1 | SAMN05443547_2066 | SAMN05443547_2065 | Methyltransferase domain-containing protein. | Hypothetical protein. | 0.491 |
SHO73698.1 | SHO73699.1 | SAMN05443547_2066 | SAMN05443547_2067 | Methyltransferase domain-containing protein. | Chromate transporter. | 0.752 |
SHO73698.1 | SHO73700.1 | SAMN05443547_2066 | SAMN05443547_2068 | Methyltransferase domain-containing protein. | Arsenate reductase. | 0.752 |
SHO73698.1 | SHO73701.1 | SAMN05443547_2066 | SAMN05443547_2069 | Methyltransferase domain-containing protein. | Arsenite transporter, ACR3 family. | 0.764 |
SHO73698.1 | bioB | SAMN05443547_2066 | SAMN05443547_0598 | Methyltransferase domain-containing protein. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.428 |
SHO73699.1 | SHO73696.1 | SAMN05443547_2067 | SAMN05443547_2064 | Chromate transporter. | Transcriptional regulator, ArsR family. | 0.467 |
SHO73699.1 | SHO73697.1 | SAMN05443547_2067 | SAMN05443547_2065 | Chromate transporter. | Hypothetical protein. | 0.493 |
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