Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHO73695.1 | SHO74021.1 | SAMN05443547_2063 | SAMN05443547_2401 | Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Hypothetical protein. | 0.422 |
SHO74021.1 | SHO73695.1 | SAMN05443547_2401 | SAMN05443547_2063 | Hypothetical protein. | Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.422 |
SHO74021.1 | SHO74022.1 | SAMN05443547_2401 | SAMN05443547_2402 | Hypothetical protein. | Hypothetical protein. | 0.710 |
SHO74021.1 | SHO74023.1 | SAMN05443547_2401 | SAMN05443547_2403 | Hypothetical protein. | Hypothetical protein. | 0.709 |
SHO74021.1 | SHO74024.1 | SAMN05443547_2401 | SAMN05443547_2404 | Hypothetical protein. | Sporadically distributed protein, TIGR04141 family. | 0.709 |
SHO74021.1 | SHO74025.1 | SAMN05443547_2401 | SAMN05443547_2405 | Hypothetical protein. | Putative phage abortive infection protein. | 0.709 |
SHO74021.1 | SHO74026.1 | SAMN05443547_2401 | SAMN05443547_2406 | Hypothetical protein. | Hypothetical protein. | 0.695 |
SHO74021.1 | SHO74027.1 | SAMN05443547_2401 | SAMN05443547_2407 | Hypothetical protein. | Hypothetical protein. | 0.675 |
SHO74021.1 | SHO74028.1 | SAMN05443547_2401 | SAMN05443547_2408 | Hypothetical protein. | Conserved hypothetical protein, ribA/ribD-fused. | 0.613 |
SHO74021.1 | tilS | SAMN05443547_2401 | SAMN05443547_1960 | Hypothetical protein. | tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | 0.422 |
SHO74022.1 | SHO74021.1 | SAMN05443547_2402 | SAMN05443547_2401 | Hypothetical protein. | Hypothetical protein. | 0.710 |
SHO74022.1 | SHO74023.1 | SAMN05443547_2402 | SAMN05443547_2403 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SHO74022.1 | SHO74024.1 | SAMN05443547_2402 | SAMN05443547_2404 | Hypothetical protein. | Sporadically distributed protein, TIGR04141 family. | 0.773 |
SHO74022.1 | SHO74025.1 | SAMN05443547_2402 | SAMN05443547_2405 | Hypothetical protein. | Putative phage abortive infection protein. | 0.773 |
SHO74022.1 | SHO74026.1 | SAMN05443547_2402 | SAMN05443547_2406 | Hypothetical protein. | Hypothetical protein. | 0.757 |
SHO74022.1 | SHO74027.1 | SAMN05443547_2402 | SAMN05443547_2407 | Hypothetical protein. | Hypothetical protein. | 0.736 |
SHO74022.1 | SHO74028.1 | SAMN05443547_2402 | SAMN05443547_2408 | Hypothetical protein. | Conserved hypothetical protein, ribA/ribD-fused. | 0.639 |
SHO74023.1 | SHO74021.1 | SAMN05443547_2403 | SAMN05443547_2401 | Hypothetical protein. | Hypothetical protein. | 0.709 |
SHO74023.1 | SHO74022.1 | SAMN05443547_2403 | SAMN05443547_2402 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SHO74023.1 | SHO74024.1 | SAMN05443547_2403 | SAMN05443547_2404 | Hypothetical protein. | Sporadically distributed protein, TIGR04141 family. | 0.773 |
page 1 of 3